Basic Information
Locus ID:
Cgl02G0832
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Belongs to the universal ribosomal protein uS3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 7046892 | 7048948 | + | Cgl02G0832 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.80 | 13,623.59 Da | 34.86 | 94.20 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02413 | 40S_S3_KH | 15 | 95 | 8.95709E-50 | - |
| Pfam | PF07650 | KH domain | 20 | 93 | 4.7E-13 | IPR004044 |
| SUPERFAMILY | SSF54814 | Prokaryotic type KH domain (KH-domain type II) | 10 | 99 | 1.57E-26 | IPR009019 |
| Gene3D | G3DSA:3.30.300.20 | - | 1 | 91 | 8.7E-49 | IPR015946 |
| Gene3D | G3DSA:3.30.1140.32 | - | 93 | 118 | 3.7E-5 | IPR036419 |
| SMART | SM00322 | kh_6 | 42 | 111 | 0.0014 | IPR004087 |
| ProSiteProfiles | PS50823 | Type-2 KH domain profile. | 21 | 92 | 11.175159 | IPR004044 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31610.1 | Ribosomal protein S3 family protein. | 0 |
| RefSeq | XP_021664469.1 | 40S ribosomal protein S3-1 [Hevea brasiliensis] | 0 |
| Q9SIP7 | Small ribosomal subunit protein uS3z OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KSP1 | 30S ribosomal protein S3, chloroplastic OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology