Basic Information
Locus ID:
Cgl02G0670
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 5715350 | 5726029 | - | Cgl02G0670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 240,995.94 Da | 46.82 | 66.95 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 864 | 950 | 6.48668E-29 | - |
| Pfam | PF00855 | PWWP domain | 864 | 950 | 7.8E-16 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 860 | 974 | 5.05E-27 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 853 | 957 | 1.1E-24 | - |
| SMART | SM00293 | PWWP_4 | 864 | 925 | 3.6E-8 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 866 | 915 | 14.23562 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1730 | 1792 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2148 | 2174 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1959 | 2001 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2083 | 2100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1959 | 1983 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1066 | 1096 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1561 | 1592 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1335 | 1374 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1066 | 1112 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2046 | 2072 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1572 | 1586 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2046 | 2100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1763 | 1787 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1741 | 1758 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_023929772.1 | uncharacterized protein LOC112041107 [Quercus suber] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6QC89 | PWWP domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_001590 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology