HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Cgl02G0593
Species & Taxonomic ID: Casuarina glauca & 3522
Genome Assembly: GCA_028551395.1
Description: LRR receptor-like serine threonine-protein kinase At3g47570
Maps and Mapping Data
Chromosome Start End Strand ID
chr02 5025706 5026361 + Cgl02G0593
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.34 10,097.07 Da 55.83 72.66 -0.35
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 4 49 4.07E-6 IPR011009
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 1 59 1.7E-6 -
KEGG Pathway
KO Term:
K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G39390.1 Leucine-rich repeat protein kinase family protein. 0
RefSeq XP_052309945.1 probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Populus trichocarpa] 0
Swiss-Prot Q2R2D5 Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. japonica OX=39947 GN=XA21 PE=1 SV=1 0
TrEMBL A0A6P9EK58 putative receptor-like protein kinase At3g47110 OS=Juglans regia OX=51240 GN=LOC109020412 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Asparagaceae Asparagus officinalis 2 AsparagusV1_03.1349.V1.1, AsparagusV1_07.1855.V1.1
Casuarinaceae Casuarina equisetifolia 1 Ceq09G0722
Casuarinaceae Casuarina glauca 2 Cgl02G0593, Cgl09G0785
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.