Basic Information
Locus ID:
Cgl02G0551
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 4540778 | 4547158 | - | Cgl02G0551 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 99,039.57 Da | 70.00 | 61.81 | -1.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 810 | 850 | 1.82237E-21 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 808 | 855 | 7.9E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 810 | 856 | 8.64E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 800 | 861 | 2.3E-13 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 811 | 850 | 10.748424 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 561 | 587 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 555 | 600 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 277 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 253 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 461 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 469 | 488 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 336 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 146 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 664 | 692 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 488 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 232 | - | - |
| Coils | Coil | Coil | 740 | 760 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_023883492.1 | uncharacterized protein LOC111995789 isoform X2 [Quercus suber] | 0 |
| TrEMBL | A0A5N6QFZ2 | RING-type domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_001773 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology