Basic Information
Locus ID:
Cgl02G0503
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 4127711 | 4129322 | + | Cgl02G0503 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 48,110.27 Da | 36.95 | 101.78 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 195 | 325 | 1.1E-15 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 28 | 133 | 9.03E-15 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 181 | 326 | 1.7E-21 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 21 | 168 | 1.5E-7 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 178 | 326 | 2.5E-13 | IPR036378 |
| SMART | SM00554 | fasc_3 | 221 | 326 | 7.6E-12 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 183 | 323 | 14.261417 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 22 | 169 | 9.992067 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 396 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 359 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 396 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60900.1 | FASCICLIN-like arabinogalactan-protein 10. | 0 |
| RefSeq | XP_042968354.1 | fasciclin-like arabinogalactan protein 10 [Carya illinoinensis] | 0 |
| Q9LZX4 | Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana OX=3702 GN=FLA10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T1RHG8 | FAS1 domain-containing protein OS=Carya illinoinensis OX=32201 GN=CIPAW_02G166200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology