Basic Information
Locus ID:
Cgl02G0489
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Short Name:
NTMC2T4.1
Description:
Synaptotagmin-like mitochondrial-lipid-binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 4006457 | 4015277 | - | Cgl02G0489 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.21 | 55,696.54 Da | 21.41 | 109.38 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00030 | C2 | 266 | 360 | 5.27337E-27 | - |
| Pfam | PF00168 | C2 domain | 264 | 360 | 1.0E-22 | IPR000008 |
| Pfam | PF17047 | Synaptotagmin-like mitochondrial-lipid-binding domain | 68 | 248 | 2.3E-17 | IPR039010 |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 262 | 391 | 1.93E-26 | IPR035892 |
| Gene3D | G3DSA:2.60.40.150 | C2 domain | 259 | 418 | 1.4E-29 | IPR035892 |
| SMART | SM00239 | C2_3c | 265 | 362 | 1.8E-19 | IPR000008 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 247 | 365 | 19.866955 | IPR000008 |
| ProSiteProfiles | PS51847 | Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. | 66 | 249 | 23.034111 | IPR031468 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 485 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 485 | 513 | - | - |
| Coils | Coil | Coil | 398 | 418 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61050.1 | Calcium-dependent lipid-binding (CaLB domain) family protein. | 0 |
| RefSeq | XP_041021361.1 | calcium-dependent lipid-binding protein-like [Juglans microcarpa x Juglans regia] | 0 |
| Q9LEX1 | Calcium-dependent lipid-binding protein OS=Arabidopsis thaliana OX=3702 GN=CLB PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I4DNA4 | synaptotagmin-5-like OS=Juglans regia OX=51240 GN=LOC108981834 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology