Basic Information
Locus ID:
Cgl02G0428
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Sister chromatid cohesion protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 3504173 | 3515774 | + | Cgl02G0428 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.09 | 91,015.60 Da | 44.88 | 73.29 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 648 | 690 | 1.65E-5 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 40 | 249 | 1.87E-6 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 648 | 697 | 2.5E-9 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 361 | 376 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 622 | 636 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 720 | 741 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 582 | 596 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 597 | 621 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 708 | 829 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 805 | 820 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 423 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 763 | 777 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 582 | 642 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 453 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 495 | - | - |
| Coils | Coil | Coil | 26 | 46 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_035539345.1 | uncharacterized protein LOC109010994 isoform X4 [Juglans regia] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A5N6QD91 | Tudor domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_001885 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology