Basic Information
Locus ID:
Cgl01G2517
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 36164809 | 36172016 | - | Cgl01G2517 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.58 | 77,361.37 Da | 55.64 | 97.86 | -0.20 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_030941807.1 | uncharacterized protein LOC115966789 [Quercus lobata] | 0 |
| TrEMBL | A0A5N6QSQ3 | F-box domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_005420 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G2233, Ceq07G1992 |
| Casuarinaceae | Casuarina glauca | 4 | Cgl01G2490, Cgl01G2516, Cgl01G2517, Cgl07G2181 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_10_RagTag.795 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-13688 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-11911 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-9044 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000004l.124 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00003964 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-18265 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-7920 |
| Salicaceae | Populus euphratica | 5 | populus_peu09581, populus_peu12799, populus_peu12841 ... |