HalophFGD

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Basic Information
Locus ID: Cgl01G2490
Species & Taxonomic ID: Casuarina glauca & 3522
Genome Assembly: GCA_028551395.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr01 35747957 35752259 - Cgl01G2490
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.26 25,077.62 Da 70.05 82.24 -0.59
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 1 49 - -
MobiDBLite mobidb-lite consensus disorder prediction 15 49 - -
Coils Coil Coil 92 126 - -
Coils Coil Coil 7 27 - -
Best hit
Source Best Hit ID Description E-value
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Casuarinaceae Casuarina equisetifolia 2 Ceq01G2233, Ceq07G1992
Casuarinaceae Casuarina glauca 4 Cgl01G2490, Cgl01G2516, Cgl01G2517, Cgl07G2181
Rhizophoraceae Bruguiera sexangula 1 evm.TU.Scaffold_10_RagTag.795
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-13688
Rhizophoraceae Ceriops tagal 1 nbisL1-mrna-11911
Rhizophoraceae Ceriops zippeliana 1 nbisL1-mrna-9044
Rhizophoraceae Kandelia candel 1 evm.TU.utg000004l.124
Rhizophoraceae Kandelia obovata 1 Maker00003964
Rhizophoraceae Rhizophora apiculata 1 nbisL1-mrna-18265
Rhizophoraceae Rhizophora mangle 1 nbisL1-mrna-7920
Salicaceae Populus euphratica 5 populus_peu09581, populus_peu12799, populus_peu12841 ...
populus_peu16794, populus_peu24954
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.