Basic Information
Locus ID:
Cgl01G2243
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 32917521 | 32919495 | + | Cgl01G2243 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.34 | 37,113.25 Da | 35.30 | 82.51 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01753 | MYND finger | 272 | 311 | 2.2E-7 | IPR002893 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 267 | 316 | 2.27E-10 | - |
| SUPERFAMILY | SSF81901 | HCP-like | 80 | 198 | 7.06E-12 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 13 | 64 | 1.31E-5 | IPR036047 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 60 | 214 | 2.2E-19 | IPR011990 |
| Gene3D | G3DSA:6.10.140.2220 | - | 260 | 316 | 3.6E-11 | - |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 269 | 311 | 10.876731 | IPR002893 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67340.1 | HCP-like superfamily protein with MYND-type zinc finger. | 0 |
| RefSeq | XP_018825186.1 | F-box protein At1g67340 [Juglans regia] | 0 |
| Q9FYF9 | F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6RPM2 | MYND-type domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_018796 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology