Basic Information
Locus ID:
Cgl01G2105
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 31697742 | 31707373 | + | Cgl01G2105 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 107,736.60 Da | 38.95 | 84.39 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 37 | 296 | 8.05734E-168 | - |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 38 | 332 | 6.5E-80 | IPR000602 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 841 | 946 | 1.2E-9 | IPR041147 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 564 | 759 | 7.9E-46 | IPR011682 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 337 | 427 | 2.9E-21 | IPR015341 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 434 | 950 | 3.61E-135 | IPR011013 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 26 | 334 | 1.11E-98 | IPR011330 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 336 | 428 | 1.8E-28 | IPR028995 |
| Gene3D | G3DSA:2.60.40.1360 | - | 827 | 953 | 6.1E-35 | - |
| Gene3D | G3DSA:2.60.40.1180 | - | 436 | 546 | 2.6E-26 | IPR013780 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 37 | 300 | 5.4E-104 | IPR027291 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 301 | 378 | 9.1E-30 | IPR037094 |
| Gene3D | G3DSA:2.70.98.30 | - | 547 | 807 | 3.5E-90 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 379 | 435 | 5.4E-22 | IPR037094 |
| SMART | SM00872 | Alpha_mann_mid_2 | 337 | 411 | 2.4E-24 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13980.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_030940373.1 | probable alpha-mannosidase At5g13980 isoform X2 [Quercus lobata] | 0 |
| Q8LPJ3 | Probable alpha-mannosidase At5g13980 OS=Arabidopsis thaliana OX=3702 GN=At5g13980 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7N2MPK4 | Alpha-mannosidase OS=Quercus lobata OX=97700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology