Basic Information
Locus ID:
Cgl01G2071
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 31409659 | 31419127 | + | Cgl01G2071 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 228,796.56 Da | 44.77 | 77.56 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 1430 | 1671 | 2.25953E-67 | IPR001220 |
| CDD | cd01098 | PAN_AP_plant | 921 | 1017 | 1.29328E-18 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 3 | 191 | 5.63212E-46 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 1764 | 2027 | 2.99426E-91 | - |
| CDD | cd00028 | B_lectin | 635 | 745 | 1.21062E-18 | IPR001480 |
| CDD | cd14066 | STKc_IRAK | 284 | 547 | 5.0933E-91 | - |
| Pfam | PF00954 | S-locus glycoprotein domain | 847 | 911 | 2.2E-14 | IPR000858 |
| Pfam | PF01453 | D-mannose binding lectin | 667 | 759 | 1.0E-25 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 1759 | 2025 | 2.0E-51 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 279 | 544 | 2.2E-51 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 1430 | 1684 | 6.0E-64 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 6 | 204 | 2.8E-47 | IPR001220 |
| Pfam | PF08276 | PAN-like domain | 932 | 1001 | 2.1E-13 | IPR003609 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1263 | 1303 | 5.56E-5 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 256 | 547 | 3.37E-84 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 67 | 301 | 2.24E-45 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1736 | 2027 | 2.02E-84 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 668 | 767 | 3.53E-21 | IPR036426 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 1430 | 1671 | 2.26E-55 | IPR013320 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 7 | 58 | 1.23E-6 | IPR013320 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 242 | 353 | 3.1E-33 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 608 | 742 | 1.6E-13 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 354 | 559 | 2.6E-61 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 1428 | 1688 | 1.4E-58 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1834 | 2038 | 2.6E-62 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 2 | 205 | 6.5E-43 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1271 | 1364 | 6.1E-7 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1722 | 1833 | 3.1E-33 | - |
| SMART | SM00220 | serkin_6 | 1758 | 2027 | 8.7E-45 | IPR000719 |
| SMART | SM00220 | serkin_6 | 278 | 547 | 1.0E-44 | IPR000719 |
| SMART | SM00473 | ntp_6 | 933 | 1016 | 7.7E-6 | IPR003609 |
| SMART | SM00108 | blect_4 | 624 | 745 | 6.6E-17 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1758 | 2033 | 40.032448 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 932 | 1028 | 9.802374 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 278 | 552 | 39.97591 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 617 | 741 | 14.179773 | IPR001480 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 1548 | 1554 | - | IPR019825 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1878 | 1890 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 398 | 410 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 284 | 306 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1764 | 1786 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2047 | 2066 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15530.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_040986097.1 | L-type lectin-domain containing receptor kinase S.1 [Juglans microcarpa x Juglans regia] | 0 |
| Q9M9E0 | L-type lectin-domain containing receptor kinase S.1 OS=Arabidopsis thaliana OX=3702 GN=LECRKS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J5BEL7 | Non-specific serine/threonine protein kinase OS=Nyssa sinensis OX=561372 GN=F0562_024311 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg18789 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30139870 |
| Apiaceae | Apium graveolens | 1 | Ag9G00575 |
| Arecaceae | Cocos nucifera | 1 | scaffold139380G000010 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103696642 |
| Asteraceae | Flaveria trinervia | 1 | Ftri16G33985 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G15530.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10007025m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g13890.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB03g026320.2N, BniB05g024760.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq01G1903 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G2071 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno05g03250 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g09400 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG10.674 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00022174 |
| Posidoniaceae | Posidonia oceanica | 11 | gene.Posoc01g06860, gene.Posoc01g06890, gene.Posoc01g17230 ... |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_11_RagTag.1070 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-14748 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-5039 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-12628 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000010l.54 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00008707 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-17036 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-8706 |
| Salicaceae | Populus euphratica | 3 | populus_peu28705, populus_peu30130, populus_peu30131 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132632599 |
| Solanaceae | Solanum chilense | 1 | SOLCI005418400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107014547 |