Basic Information
Locus ID:
Cgl01G1990
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
C1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 30685527 | 30689598 | - | Cgl01G1990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.74 | 53,383.80 Da | 52.60 | 72.26 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03107 | C1 domain | 66 | 115 | 1.5E-6 | IPR004146 |
| Pfam | PF03107 | C1 domain | 189 | 221 | 2.9E-6 | IPR004146 |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 182 | 235 | 4.71E-7 | - |
| SUPERFAMILY | SSF57889 | Cysteine-rich domain | 91 | 175 | 5.46E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 341 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_035540471.1 | uncharacterized protein LOC109019684 [Juglans regia] | 0 |
| TrEMBL | A0A2I4HNB4 | uncharacterized protein LOC109019684 OS=Juglans regia OX=51240 GN=LOC109019684 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 3 | Ceq07G2182, Ceq07G2183, Ceq07G2184 |
| Casuarinaceae | Casuarina glauca | 8 | Cgl01G1990, Cgl04G0671, Cgl04G0734, Cgl07G2393, Cgl07G2398 ... |