HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Cgl01G1743
Species & Taxonomic ID: Casuarina glauca & 3522
Genome Assembly: GCA_028551395.1
Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
Chromosome Start End Strand ID
chr01 27931926 27947606 - Cgl01G1743
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.06 240,781.80 Da 41.57 95.87 -0.04
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF13516 Leucine Rich repeat 144 159 0.85 IPR001611
Pfam PF08263 Leucine rich repeat N-terminal domain 1038 1077 1.7E-8 IPR013210
Pfam PF00069 Protein kinase domain 1912 2182 3.6E-44 IPR000719
Pfam PF13516 Leucine Rich repeat 315 330 0.043 IPR001611
Pfam PF13516 Leucine Rich repeat 1301 1316 0.043 IPR001611
Pfam PF08263 Leucine rich repeat N-terminal domain 52 91 2.5E-8 IPR013210
Pfam PF13516 Leucine Rich repeat 438 454 0.6 IPR001611
Pfam PF13855 Leucine rich repeat 730 788 1.4E-9 IPR001611
Pfam PF13855 Leucine rich repeat 1354 1414 1.8E-6 IPR001611
Pfam PF13855 Leucine rich repeat 1716 1774 2.1E-10 IPR001611
Pfam PF13516 Leucine Rich repeat 1130 1145 0.85 IPR001611
Pfam PF00560 Leucine Rich Repeat 369 390 1.6 IPR001611
SUPERFAMILY SSF52058 L domain-like 74 405 7.14E-45 -
SUPERFAMILY SSF52058 L domain-like 697 816 5.67E-26 -
SUPERFAMILY SSF52047 RNI-like 337 633 1.88E-54 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 1896 2194 3.14E-75 IPR011009
SUPERFAMILY SSF52047 RNI-like 1323 1619 1.96E-55 -
SUPERFAMILY SSF52047 RNI-like 1085 1447 5.81E-55 -
SUPERFAMILY SSF52058 L domain-like 1683 1814 2.78E-28 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1176 1807 0.0 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 48 186 6.2E-26 IPR032675
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 1873 1985 2.8E-36 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1034 1173 9.3E-28 IPR032675
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 1986 2209 7.3E-58 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 190 820 1.2E-299 IPR032675
Gene3D G3DSA:3.30.1490.310 - 1630 1687 0.0 -
Gene3D G3DSA:3.30.1490.310 - 644 701 1.2E-299 -
SMART SM00220 serkin_6 1910 2184 1.2E-36 IPR000719
SMART SM00369 LRR_typ_2 1761 1784 410.0 IPR003591
SMART SM00369 LRR_typ_2 1573 1597 35.0 IPR003591
SMART SM00369 LRR_typ_2 1327 1351 180.0 IPR003591
SMART SM00369 LRR_typ_2 1713 1736 200.0 IPR003591
SMART SM00369 LRR_typ_2 587 611 35.0 IPR003591
SMART SM00369 LRR_typ_2 751 774 70.0 IPR003591
SMART SM00369 LRR_typ_2 240 264 410.0 IPR003591
SMART SM00369 LRR_typ_2 1104 1127 100.0 IPR003591
SMART SM00369 LRR_typ_2 1302 1326 45.0 IPR003591
SMART SM00369 LRR_typ_2 1737 1760 30.0 IPR003591
SMART SM00369 LRR_typ_2 316 340 45.0 IPR003591
SMART SM00369 LRR_typ_2 341 365 220.0 IPR003591
SMART SM00369 LRR_typ_2 727 750 160.0 IPR003591
SMART SM00369 LRR_typ_2 190 214 300.0 IPR003591
SMART SM00369 LRR_typ_2 1176 1200 300.0 IPR003591
ProSiteProfiles PS51450 Leucine-rich repeat profile. 318 339 7.596445 IPR001611
ProSiteProfiles PS50011 Protein kinase domain profile. 1910 2189 38.025421 IPR000719
ProSiteProfiles PS51450 Leucine-rich repeat profile. 1304 1325 7.596445 IPR001611
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 1916 1939 - IPR017441
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 2033 2045 - IPR008271
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G13380.1 BRI1-like 3. Similar to BRI, brassinosteroid receptor protein. 0
RefSeq XP_038690478.1 serine/threonine-protein kinase BRI1-like 1 [Tripterygium wilfordii] 0
Swiss-Prot Q9LJF3 Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana OX=3702 GN=BRL3 PE=1 SV=1 0
TrEMBL A0A5N6RKF2 non-specific serine/threonine protein kinase OS=Carpinus fangiana OX=176857 GN=FH972_016969 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 5 jg16969, jg20134, jg20597, jg39452, jg5096
Aizoaceae Mesembryanthemum crystallinum 2 gene_13304, gene_17787
Amaranthaceae Atriplex hortensis 3 Ah026997, Ah027172, Ah035268
Amaranthaceae Beta vulgaris 2 BVRB_2g024180, BVRB_6g131900
Amaranthaceae Salicornia bigelovii 6 Sbi_jg13558, Sbi_jg21385, Sbi_jg22467, Sbi_jg30918 ...
Sbi_jg52335, Sbi_jg58360
Amaranthaceae Salicornia europaea 3 Seu_jg16345, Seu_jg25960, Seu_jg9522
Amaranthaceae Suaeda aralocaspica 3 GOSA_00016421, GOSA_00017518, GOSA_00023162
Amaranthaceae Suaeda glauca 6 Sgl33353, Sgl33704, Sgl38707, Sgl39015, Sgl62901, Sgl67514
Amaranthaceae Chenopodium album 8 gene:ENSEOMG00000000128, gene:ENSEOMG00000001631 ...
gene:ENSEOMG00000003080, gene:ENSEOMG00000003519, gene:ENSEOMG00000020379, gene:ENSEOMG00000025380, gene:ENSEOMG00000028073, gene:ENSEOMG00000049354
Amaranthaceae Chenopodium quinoa 6 CQ.Regalona.r1.1BG0019470, CQ.Regalona.r1.2AG0021170 ...
CQ.Regalona.r1.6AG0021280, CQ.Regalona.r1.6AG0022780, CQ.Regalona.r1.6BG0022460, CQ.Regalona.r1.6BG0024100
Anacardiaceae Pistacia vera 3 pistato.v30043920, pistato.v30150980, pistato.v30219230
Apiaceae Apium graveolens 5 Ag3G01242, Ag3G02408, Ag4G02200, Ag7G02272, Ag8G01911
Arecaceae Cocos nucifera 6 COCNU_01G006760, COCNU_02G000700, COCNU_05G009110 ...
COCNU_06G001450, COCNU_11G010960, COCNU_14G000730
Arecaceae Phoenix dactylifera 6 gene-LOC103696970, gene-LOC103702338, gene-LOC103704826 ...
gene-LOC103710640, gene-LOC103713759, gene-LOC103720660
Asparagaceae Asparagus officinalis 4 AsparagusV1_01.2219.V1.1, AsparagusV1_03.1255.V1.1 ...
AsparagusV1_05.1187.V1.1, AsparagusV1_08.577.V1.1
Asteraceae Flaveria trinervia 4 Ftri12G24194, Ftri12G31250, Ftri15G22334, Ftri17G02835
Brassicaceae Arabidopsis thaliana 4 AT1G55610.1, AT2G01950.1, AT3G13380.1, AT4G39400.1
Brassicaceae Eutrema salsugineum 4 Thhalv10003548m.g.v1.0, Thhalv10011192m.g.v1.0 ...
Thhalv10019932m.g.v1.0, Thhalv10024249m.g.v1.0
Brassicaceae Schrenkiella parvula 4 Sp1g41230.v2.2, Sp2g13390.v2.2, Sp3g11570.v2.2 ...
Sp7g36460.v2.2
Brassicaceae Brassica nigra 5 BniB01g051820.2N, BniB02g065260.2N, BniB03g015200.2N ...
BniB05g000520.2N, BniB07g000790.2N
Casuarinaceae Casuarina equisetifolia 2 Ceq01G1580, Ceq06G1844
Casuarinaceae Casuarina glauca 3 Cgl01G1743, Cgl06G1908, Cgl09G0901
Cymodoceaceae Cymodocea nodosa 3 gene.Cymno06g09320, gene.Cymno12g00570, gene.Cymno16g00720
Hydrocharitaceae Thalassia testudinum 3 gene.Thate03g19520, gene.Thate05g25160, gene.Thate09g18080
Malvaceae Hibiscus hamabo Siebold & Zucc. 1 nbisL1-mrna-7279
Nitrariaceae Nitraria sibirica 3 evm.TU.LG02.779, evm.TU.LG03.1129, evm.TU.LG05.2132
Plantaginaceae Plantago ovata 3 Pov_00004331, Pov_00020870, Pov_00025891
Plumbaginaceae Limonium bicolor 2 Lb1G06042, Lb4G25660
Poaceae Echinochloa crus-galli 1 CH08.1273
Poaceae Eleusine coracana subsp. coracana 9 gene-QOZ80_1AG0031240, gene-QOZ80_1BG0081200 ...
gene-QOZ80_2AG0119340, gene-QOZ80_2BG0174110, gene-QOZ80_6AG0520910, gene-QOZ80_6BG0473390, gene-QOZ80_8AG0627020, gene-QOZ80_8AG0627030, gene-QOZ80_8BG0655710
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.3HG0235070.1.CDS1 ...
HORVU.MOREX.r3.3HG0285210.1.CDS1, HORVU.MOREX.r3.5HG0471560.1.CDS1
Poaceae Lolium multiflorum 2 gene-QYE76_004382, gene-QYE76_054950
Poaceae Oryza coarctata 6 Oco01G020520, Oco02G019250, Oco16G006440, Oco17G001930 ...
Oco18G001830, Oco19G000240
Poaceae Oryza sativa 4 LOC_Os01g52050.1, LOC_Os08g25380.1, LOC_Os09g12240.1 ...
LOC_Os10g02500.1
Poaceae Paspalum vaginatum 4 gene-BS78_01G267200, gene-BS78_02G140500 ...
gene-BS78_03G257300, gene-BS78_09G256400
Poaceae Puccinellia tenuiflora 4 Pt_Chr0500404, Pt_Chr0602728, Pt_Chr0602860, Pt_Chr0702726
Poaceae Sporobolus alterniflorus 11 Chr02G011190, Chr02G012090, Chr03G015010, Chr05G022490 ...
Chr06G021770, Chr08G015100, Chr0G030680, Chr11G015700, Chr15G017360, Chr21G006730, Chr29G007540
Poaceae Thinopyrum elongatum 3 Tel3E01G173400, Tel3E01G416500, Tel5E01G300700
Poaceae Triticum dicoccoides 6 gene_TRIDC3AG012010, gene_TRIDC3AG036670 ...
gene_TRIDC3BG016160, gene_TRIDC3BG041310, gene_TRIDC5AG028880, gene_TRIDC5BG030350
Poaceae Triticum aestivum 9 TraesCS3A02G099400.1.cds1, TraesCS3A02G245000.1.cds1 ...
TraesCS3B02G115800.1.cds1, TraesCS3B02G275000.1.cds1, TraesCS3D02G099700.1.cds1, TraesCS3D02G246500.1.cds1, TraesCS5A02G177300.1.cds1, TraesCS5B02G174400.1.cds1, TraesCS5D02G181500.1.cds1
Poaceae Zea mays 5 Zm00001eb026010_P001, Zm00001eb154730_P001 ...
Zm00001eb177520_P001, Zm00001eb309030_P001, Zm00001eb361520_P001
Poaceae Zoysia japonica 5 nbis-gene-12750, nbis-gene-26311, nbis-gene-28793 ...
nbis-gene-43830, nbis-gene-53180
Poaceae Zoysia macrostachya 5 Zma_g11019, Zma_g15818, Zma_g29683, Zma_g31885, Zma_g8534
Portulacaceae Portulaca oleracea 4 evm.TU.LG03.2364, evm.TU.LG07.323, evm.TU.LG15.634 ...
evm.TU.LG17.1410
Posidoniaceae Posidonia oceanica 4 gene.Posoc02g22660, gene.Posoc03g09820, gene.Posoc07g05710 ...
gene.Posoc09g11180
Rhizophoraceae Bruguiera sexangula 4 evm.TU.Scaffold_17_RagTag.717, evm.TU.Scaffold_3_RagTag.1028 ...
evm.TU.Scaffold_6_RagTag.1611, evm.TU.Scaffold_7_RagTag.3
Rhizophoraceae Carallia pectinifolia 3 nbisL1-mrna-17573, nbisL1-mrna-19750, nbisL1-mrna-23409
Rhizophoraceae Ceriops tagal 4 nbisL1-mrna-10201, nbisL1-mrna-12590, nbisL1-mrna-17770 ...
nbisL1-mrna-19847
Rhizophoraceae Ceriops zippeliana 4 nbisL1-mrna-12169, nbisL1-mrna-20030, nbisL1-mrna-22391 ...
nbisL1-mrna-2296
Rhizophoraceae Kandelia candel 4 add.evm.TU.utg000011l.382, add.evm.TU.utg000013l.133 ...
add.evm.TU.utg000019l.277, add.evm.TU.utg000028l.1
Rhizophoraceae Kandelia obovata 2 Maker00004508, Maker00007000
Rhizophoraceae Rhizophora apiculata 4 nbisL1-mrna-19939, nbisL1-mrna-21027, nbisL1-mrna-22836 ...
nbisL1-mrna-22860
Rhizophoraceae Rhizophora mangle 4 nbisL1-mrna-14331, nbisL1-mrna-1719, nbisL1-mrna-22537 ...
nbisL1-mrna-4469
Salicaceae Populus euphratica 6 populus_peu00004, populus_peu07264, populus_peu13880 ...
populus_peu17081, populus_peu21261, populus_peu23048
Solanaceae Lycium barbarum 3 gene-LOC132614975, gene-LOC132615004, gene-LOC132616627
Solanaceae Solanum chilense 4 SOLCI002088200, SOLCI002216100, SOLCI002599500 ...
SOLCI004292600
Solanaceae Solanum pennellii 4 gene-LOC107015854, gene-LOC107017735, gene-LOC107024267 ...
gene-LOC107027997
Tamaricaceae Reaumuria soongarica 3 STRG.19650_chr07_-, STRG.5156_chr03_-, gene_2243
Tamaricaceae Tamarix chinensis 3 TC03G0328, TC04G0446, TC11G0356
Zosteraceae Zostera marina 5 Zosma01g05850.v3.1, Zosma03g14440.v3.1, Zosma03g14450.v3.1 ...
Zosma05g14380.v3.1, Zosma05g25890.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.