Basic Information
Locus ID:
Cgl01G1579
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
glycerophosphoryl diester phosphodiesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 26327657 | 26335918 | + | Cgl01G1579 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 122,191.63 Da | 39.53 | 84.16 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 717 | 1017 | 4.44218E-155 | - |
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 401 | 700 | 1.39683E-165 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 724 | 1013 | 5.9E-29 | IPR030395 |
| Pfam | PF00295 | Glycosyl hydrolases family 28 | 101 | 399 | 2.1E-86 | IPR000743 |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 436 | 695 | 9.9E-7 | IPR030395 |
| SUPERFAMILY | SSF51126 | Pectin lyase-like | 62 | 398 | 5.34E-96 | IPR011050 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 400 | 696 | 2.88E-41 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 716 | 1017 | 1.62E-39 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 715 | 1017 | 7.5E-42 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 401 | 698 | 4.6E-39 | IPR017946 |
| Gene3D | G3DSA:2.160.20.10 | - | 59 | 400 | 3.5E-96 | IPR012334 |
| SMART | SM00710 | pbh1 | 275 | 295 | 3400.0 | IPR006626 |
| SMART | SM00710 | pbh1 | 368 | 395 | 2700.0 | IPR006626 |
| SMART | SM00710 | pbh1 | 601 | 623 | 5500.0 | IPR006626 |
| SMART | SM00710 | pbh1 | 335 | 356 | 990.0 | IPR006626 |
| SMART | SM00710 | pbh1 | 225 | 251 | 250.0 | IPR006626 |
| SMART | SM00710 | pbh1 | 252 | 273 | 1500.0 | IPR006626 |
| SMART | SM00710 | pbh1 | 305 | 326 | 46.0 | IPR006626 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 717 | 1018 | 34.840977 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 401 | 701 | 39.891682 | IPR030395 |
| ProSitePatterns | PS00502 | Polygalacturonase active site. | 282 | 295 | - | IPR000743 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 35 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26690.1 | PLC-like phosphodiesterase family protein. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | 0 |
| RefSeq | XP_018812474.1 | glycerophosphodiester phosphodiesterase GDPDL3-like [Juglans regia] | 0 |
| Q9SZ11 | Glycerophosphodiester phosphodiesterase GDPDL3 OS=Arabidopsis thaliana OX=3702 GN=GDPDL3 PE=2 SV=3 | 0 | |
| TrEMBL | A0A5N6RVU9 | glycerophosphodiester phosphodiesterase OS=Carpinus fangiana OX=176857 GN=FH972_020248 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology