Basic Information
Locus ID:
Cgl01G1573
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
glycerophosphoryl diester phosphodiesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 26262157 | 26268800 | + | Cgl01G1573 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 82,944.38 Da | 40.00 | 91.31 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 367 | 666 | 1.54605E-155 | - |
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 50 | 349 | 2.50787E-174 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 85 | 344 | 7.1E-8 | IPR030395 |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 373 | 662 | 4.9E-26 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 366 | 666 | 1.94E-37 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 48 | 350 | 7.33E-44 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 365 | 667 | 1.3E-40 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 49 | 349 | 4.5E-39 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 366 | 667 | 39.680557 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 50 | 350 | 40.557529 | IPR030395 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 718 | 734 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 717 | 738 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26690.1 | PLC-like phosphodiesterase family protein. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | 0 |
| RefSeq | XP_018812474.1 | glycerophosphodiester phosphodiesterase GDPDL3-like [Juglans regia] | 0 |
| Q9SZ11 | Glycerophosphodiester phosphodiesterase GDPDL3 OS=Arabidopsis thaliana OX=3702 GN=GDPDL3 PE=2 SV=3 | 0 | |
| TrEMBL | A0A2I4DZ93 | glycerophosphodiester phosphodiesterase OS=Juglans regia OX=51240 GN=LOC108984850 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology