Basic Information
Locus ID:
Cgl01G1572
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
glycerophosphoryl diester phosphodiesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 26240288 | 26254839 | + | Cgl01G1572 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 159,212.38 Da | 37.91 | 93.56 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 738 | 1037 | 1.792E-157 | - |
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 1054 | 1354 | 7.3091E-149 | - |
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 41 | 341 | 1.61366E-153 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 365 | 628 | 1.2E-21 | IPR030395 |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 1061 | 1350 | 1.2E-27 | IPR030395 |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 745 | 1032 | 3.2E-6 | IPR030395 |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 76 | 336 | 7.6E-7 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 1053 | 1354 | 1.7E-38 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 40 | 337 | 2.88E-39 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 358 | 633 | 4.45E-35 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 737 | 1033 | 4.19E-41 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 1052 | 1354 | 6.0E-42 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 356 | 634 | 4.3E-37 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 39 | 340 | 3.9E-36 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 737 | 1035 | 1.1E-38 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 1054 | 1355 | 34.524292 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 358 | 634 | 33.046436 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 738 | 1038 | 39.558754 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 41 | 342 | 36.75732 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26690.1 | PLC-like phosphodiesterase family protein. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | 0 |
| RefSeq | XP_018812474.1 | glycerophosphodiester phosphodiesterase GDPDL3-like [Juglans regia] | 0 |
| Q9SZ11 | Glycerophosphodiester phosphodiesterase GDPDL3 OS=Arabidopsis thaliana OX=3702 GN=GDPDL3 PE=2 SV=3 | 0 | |
| TrEMBL | A0A5C7IEQ3 | glycerophosphodiester phosphodiesterase OS=Acer yangbiense OX=1000413 GN=EZV62_008717 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology