Basic Information
Locus ID:
Cgl01G1149
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
SPA1-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 21903924 | 21912451 | + | Cgl01G1149 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 103,697.01 Da | 53.16 | 79.42 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 687 | 724 | 1.1E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 791 | 826 | 0.0034 | IPR001680 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 82 | 359 | 1.25E-18 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 599 | 928 | 2.14E-49 | IPR036322 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 103 | 373 | 1.6E-23 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 577 | 931 | 4.8E-114 | IPR015943 |
| SMART | SM00320 | WD40_4 | 788 | 826 | 1.3E-5 | IPR001680 |
| SMART | SM00220 | serkin_6 | 43 | 362 | 1.5E-4 | IPR000719 |
| SMART | SM00320 | WD40_4 | 745 | 784 | 1.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 835 | 874 | 7.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 593 | 631 | 1.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 885 | 929 | 51.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 684 | 724 | 9.9E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 642 | 681 | 27.0 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 691 | 726 | 10.390142 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 795 | 829 | 10.442869 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 795 | 829 | 12.546961 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 691 | 726 | 12.480124 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 362 | 10.661997 | IPR000719 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 813 | 827 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 668 | 682 | 5.4E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 813 | 827 | 5.4E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 711 | 725 | 5.4E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 172 | 212 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 260 | - | - |
| Coils | Coil | Coil | 366 | 386 | - | - |
| Coils | Coil | Coil | 403 | 423 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15354.3 | - | 0 |
| RefSeq | XP_023870296.1 | protein SPA1-RELATED 3 isoform X2 [Quercus suber] | 0 |
| Q9LJR3 | Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6RWV8 | Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_020583 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology