Basic Information
Locus ID:
Cgl01G1136
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 21736602 | 21738911 | - | Cgl01G1136 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.09 | 33,500.46 Da | 52.42 | 61.88 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16745 | RING-HC_AtRMA_like | 76 | 126 | 2.83116E-25 | - |
| Pfam | PF00097 | Zinc finger, C3HC4 type (RING finger) | 78 | 124 | 2.2E-8 | IPR018957 |
| SUPERFAMILY | SSF57850 | RING/U-box | 72 | 137 | 1.17E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 57 | 150 | 9.7E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 78 | 124 | 1.7E-10 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 78 | 125 | 12.784338 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 93 | 102 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 139 | 167 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27470.1 | RING membrane-anchor 3. Encodes a RING finger E3 ubiquitin ligase. | 0 |
| RefSeq | XP_018822888.1 | E3 ubiquitin-protein ligase RMA3-like [Juglans regia] | 0 |
| Q8GUK7 | E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6RWX4 | RING-type E3 ubiquitin transferase OS=Carpinus fangiana OX=176857 GN=FH972_020600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology