Basic Information
Locus ID:
Cgl01G0269
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
calcium-binding protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 4652046 | 4653692 | + | Cgl01G0269 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 23,843.64 Da | 34.99 | 87.63 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 16 | 77 | 3.93401E-10 | IPR002048 |
| CDD | cd00051 | EFh | 92 | 154 | 1.69204E-19 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 16 | 77 | 3.1E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 90 | 153 | 1.1E-15 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 7 | 155 | 6.73E-43 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 1 | 80 | 5.9E-21 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 81 | 168 | 4.0E-24 | - |
| SMART | SM00054 | efh_1 | 128 | 156 | 2.9E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 92 | 120 | 1.1E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 16 | 44 | 6.4E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 52 | 80 | 14.0 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 12 | 47 | 14.90394 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 124 | 159 | 13.899706 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 88 | 123 | 14.90394 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 48 | 83 | 8.739058 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 137 | 149 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 25 | 37 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 61 | 73 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 101 | 113 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03000.1 | EF hand calcium-binding protein family. Calmodulin like protein localized in the plant vacuolar compartment with a function of binding and modifying the activity of a tonoplast transporter (AtNHX1) from within the vacuole in a Ca+2- and pH-dependent manner | 0 |
| RefSeq | XP_018809108.1 | probable calcium-binding protein CML11 [Juglans regia] | 0 |
| Q9M8U1 | Probable calcium-binding protein CML18 OS=Arabidopsis thaliana OX=3702 GN=CML18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I4DPP2 | probable calcium-binding protein CML11 OS=Juglans regia OX=51240 GN=LOC108982247 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology