Basic Information
Locus ID:
Cgl01G0122
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 2441474 | 2453157 | - | Cgl01G0122 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 118,469.56 Da | 45.43 | 74.04 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18635 | CD_CMT3_like | 578 | 630 | 3.81139E-23 | - |
| Pfam | PF00385 | Chromo (CHRromatin Organisation MOdifier) domain | 588 | 631 | 2.1E-6 | IPR023780 |
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 471 | 520 | 1.4E-4 | IPR001525 |
| Pfam | PF01426 | BAH domain | 320 | 432 | 4.0E-10 | IPR001025 |
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 640 | 999 | 1.2E-32 | IPR001525 |
| SUPERFAMILY | SSF54160 | Chromo domain-like | 578 | 638 | 1.37E-7 | IPR016197 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 468 | 1000 | 1.11E-79 | IPR029063 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 471 | 1017 | 2.7E-247 | - |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 794 | 966 | 2.7E-247 | - |
| Gene3D | G3DSA:2.30.30.490 | - | 256 | 420 | 6.6E-49 | IPR043151 |
| SMART | SM00439 | BAH_4 | 319 | 435 | 3.1E-24 | IPR001025 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 319 | 435 | 18.110786 | IPR001025 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 469 | 1007 | 46.267353 | IPR001525 |
| ProSitePatterns | PS00094 | C-5 cytosine-specific DNA methylases active site. | 646 | 658 | - | IPR018117 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 689 | 703 | 1.0E-12 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 470 | 486 | 1.0E-12 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 735 | 748 | 1.0E-12 | IPR001525 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 149 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 143 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19020.1 | chromomethylase 2. | 0 |
| RefSeq | XP_035542187.1 | DNA (cytosine-5)-methyltransferase CMT2-like isoform X3 [Juglans regia] | 0 |
| Q94F87 | DNA (cytosine-5)-methyltransferase CMT2 OS=Arabidopsis thaliana OX=3702 GN=CMT2 PE=2 SV=3 | 0 | |
| TrEMBL | A0A5N6R441 | Cytosine-specific methyltransferase OS=Carpinus fangiana OX=176857 GN=FH972_012561 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology