Basic Information
Locus ID:
Cgl01G0025
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 264992 | 266636 | - | Cgl01G0025 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.86 | 51,461.74 Da | 31.47 | 100.41 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 247 | 265 | 0.06 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 99 | 159 | 2.1E-10 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 72 | 7.5E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 396 | 458 | 3.67E-9 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 38 | 386 | 1.45E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 184 | 3.4E-43 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 185 | 291 | 5.8E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 292 | 386 | 1.5E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 388 | 459 | 1.5E-12 | IPR032675 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20270.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. | 0 |
| RefSeq | XP_042977257.1 | receptor-like protein kinase HSL1 [Carya illinoinensis] | 0 |
| TrEMBL | A0A6A1VRF2 | LRRNT_2 domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR4G022231 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah035061 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30022470 |
| Apiaceae | Apium graveolens | 1 | Ag8G00331 |
| Asteraceae | Flaveria trinervia | 1 | Ftri3G30941 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G0025 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_4_RagTag.1897 |