Basic Information
Locus ID:
Ceq09G1623
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
A domain family that is part of the cupin metalloenzyme superfamily.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 21074337 | 21085178 | + | Ceq09G1623 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 177,408.95 Da | 48.34 | 64.80 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02208 | cupin_RmlC-like | 1484 | 1544 | 0.00268355 | - |
| Pfam | PF10497 | Zinc-finger domain of monoamine-oxidase A repressor R1 | 829 | 892 | 6.0E-6 | IPR018866 |
| Pfam | PF02373 | JmjC domain, hydroxylase | 1447 | 1543 | 1.0E-15 | IPR003347 |
| SUPERFAMILY | SSF51197 | Clavaminate synthase-like | 1138 | 1580 | 1.36E-38 | - |
| Gene3D | G3DSA:2.60.120.650 | Cupin | 1126 | 1569 | 1.2E-149 | - |
| SMART | SM00384 | AT_hook_2 | 487 | 499 | 8.8 | IPR017956 |
| SMART | SM00384 | AT_hook_2 | 520 | 532 | 12.0 | IPR017956 |
| SMART | SM00384 | AT_hook_2 | 420 | 432 | 7.3 | IPR017956 |
| SMART | SM00384 | AT_hook_2 | 374 | 386 | 6.0 | IPR017956 |
| SMART | SM00558 | cupin_9 | 1240 | 1560 | 4.3E-71 | IPR003347 |
| SMART | SM00384 | AT_hook_2 | 609 | 621 | 4.4 | IPR017956 |
| SMART | SM00384 | AT_hook_2 | 547 | 559 | 2.1 | IPR017956 |
| ProSiteProfiles | PS51667 | WRC domain profile. | 4 | 49 | 13.079426 | IPR014977 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 833 | 880 | 9.420654 | IPR001841 |
| ProSiteProfiles | PS51184 | JmjC domain profile. | 1259 | 1560 | 25.53767 | IPR003347 |
| PRINTS | PR00930 | High mobility group protein (HMGY) signature | 536 | 555 | 4.7E-5 | IPR000116 |
| PRINTS | PR00929 | AT-hook-like domain signature | 485 | 496 | 9.0E-5 | IPR017956 |
| PRINTS | PR00929 | AT-hook-like domain signature | 545 | 555 | 9.0E-5 | IPR017956 |
| PRINTS | PR00930 | High mobility group protein (HMGY) signature | 522 | 533 | 4.7E-5 | IPR000116 |
| PRINTS | PR00930 | High mobility group protein (HMGY) signature | 485 | 497 | 4.7E-5 | IPR000116 |
| PRINTS | PR00929 | AT-hook-like domain signature | 374 | 384 | 9.0E-5 | IPR017956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 369 | 731 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 463 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 683 | 716 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 391 | 422 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 547 | 561 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 593 | 608 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00990.1 | Transcription factor jumonji (jmjC) domain-containing protein. | 0 |
| RefSeq | XP_018824662.1 | uncharacterized protein LOC108994046 isoform X5 [Juglans regia] | 0 |
| Q8VYB9 | Lysine-specific demethylase JMJ27 OS=Arabidopsis thaliana OX=3702 GN=JMJ27 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I4EZ34 | uncharacterized protein LOC108994046 isoform X5 OS=Juglans regia OX=51240 GN=LOC108994046 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology