Basic Information
Locus ID:
Ceq09G1111
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 16763322 | 16764119 | - | Ceq09G1111 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.12 | 28,508.10 Da | 70.95 | 71.80 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 77 | 120 | 7.63528E-18 | - |
| Pfam | PF13639 | Ring finger domain | 77 | 120 | 5.4E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 57 | 130 | 2.36E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 53 | 126 | 3.1E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 78 | 119 | 2.3E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 78 | 120 | 13.079398 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 213 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 150 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 246 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16720.1 | TOXICOS EN LEVADURA 2. RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations. | 0 |
| RefSeq | XP_018815733.2 | RING-H2 finger protein ATL2-like [Juglans regia] | 0 |
| Q8L9T5 | RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5N6RG40 | RING-type domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_015425 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology