Basic Information
Locus ID:
Ceq09G0846
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 13560459 | 13565958 | - | Ceq09G0846 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 61,770.33 Da | 51.87 | 65.07 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 365 | 387 | 1.2E-5 | IPR001876 |
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 286 | 311 | 6.2E-8 | IPR001876 |
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 330 | 354 | 4.2E-7 | IPR001876 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 324 | 357 | 1.67E-6 | IPR036443 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 359 | 392 | 9.42E-6 | IPR036443 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 279 | 310 | 2.28E-6 | IPR036443 |
| Gene3D | G3DSA:4.10.1060.10 | - | 359 | 393 | 4.2E-9 | - |
| Gene3D | G3DSA:4.10.1060.10 | - | 322 | 358 | 1.5E-12 | - |
| Gene3D | G3DSA:4.10.1060.10 | - | 277 | 311 | 4.7E-14 | - |
| SMART | SM00547 | zf_4 | 365 | 389 | 2.3E-5 | IPR001876 |
| SMART | SM00547 | zf_4 | 332 | 356 | 7.5E-7 | IPR001876 |
| SMART | SM00547 | zf_4 | 288 | 312 | 4.3E-7 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 286 | 309 | 9.506543 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 363 | 392 | 9.472667 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 330 | 359 | 9.721095 | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 367 | 386 | - | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 334 | 353 | - | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 290 | 309 | - | IPR001876 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 394 | 439 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 404 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 492 | 538 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 73 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70650.1 | Ran BP2/NZF zinc finger-like superfamily protein. | 0 |
| RefSeq | XP_023910999.1 | uncharacterized protein LOC112022607 [Quercus suber] | 0 |
| TrEMBL | A0A5N6REN9 | Zinc finger protein VAR3, chloroplastic OS=Carpinus fangiana OX=176857 GN=FH972_015014 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology