Basic Information
Locus ID:
Ceq09G0810
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
E3 ubiquitin- protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 12856572 | 12860331 | - | Ceq09G0810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 40,264.76 Da | 52.89 | 93.86 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16474 | RING-H2_RNF111_like | 316 | 360 | 4.88531E-19 | - |
| Pfam | PF13639 | Ring finger domain | 316 | 358 | 4.6E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 305 | 362 | 3.28E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 262 | 362 | 5.5E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 317 | 357 | 7.5E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 317 | 358 | 12.710573 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 170 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G68070.1 | Zinc finger, C3HC4 type (RING finger) family protein. | 0 |
| RefSeq | XP_042983035.1 | E3 ubiquitin protein ligase RIE1 [Carya illinoinensis] | 0 |
| Q8GUU2 | E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2I4FCZ9 | E3 ubiquitin protein ligase RIE1-like OS=Juglans regia OX=51240 GN=LOC108997616 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology