Basic Information
Locus ID:
Ceq09G0660
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 10053990 | 10059560 | - | Ceq09G0660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.13 | 48,240.30 Da | 50.15 | 107.66 | 0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 66 | 421 | 1.49481E-51 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 67 | 381 | 5.1E-21 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 69 | 424 | 4.58E-35 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 63 | 421 | 3.4E-32 | IPR036259 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 78 | 94 | - | IPR005829 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_042957680.1 | hippocampus abundant transcript-like protein 1 isoform X1 [Carya illinoinensis] | 0 |
| TrEMBL | A0A8T1NAJ9 | MFS domain-containing protein OS=Carya illinoinensis OX=32201 GN=CIPAW_14G032600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology