Basic Information
Locus ID:
Ceq09G0406
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Endochitinase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 5757488 | 5765716 | + | Ceq09G0406 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 40,611.85 Da | 27.48 | 63.06 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00325 | chitinase_GH19 | 86 | 307 | 1.98024E-98 | - |
| CDD | cd06921 | ChtBD1_GH19_hevein | 21 | 60 | 5.56805E-18 | - |
| Pfam | PF00182 | Chitinase class I | 307 | 379 | 1.8E-33 | IPR000726 |
| Pfam | PF00187 | Chitin recognition protein | 22 | 59 | 6.7E-14 | IPR001002 |
| Pfam | PF00182 | Chitinase class I | 85 | 306 | 8.8E-123 | IPR000726 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 81 | 306 | 3.09E-99 | IPR023346 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 305 | 385 | 3.66E-26 | IPR023346 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 22 | 68 | 4.06E-14 | IPR036861 |
| Gene3D | G3DSA:1.10.530.10 | - | 90 | 306 | 7.3E-109 | - |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 168 | 223 | 7.3E-109 | - |
| Gene3D | G3DSA:1.10.530.10 | - | 307 | 386 | 3.5E-31 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 20 | 62 | 3.9E-17 | IPR036861 |
| SMART | SM00270 | ChitinBD_3 | 22 | 59 | 3.1E-18 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 1 | 315 | 2.1E-119 | IPR016283 |
| PIRSF | PIRSF001060 | Endochitinase | 305 | 386 | 1.4E-20 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 20 | 61 | 10.841081 | IPR001002 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 32 | 51 | - | IPR018371 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 227 | 237 | - | IPR000726 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 103 | 125 | - | IPR000726 |
| PRINTS | PR00451 | Chitin-binding domain signature | 30 | 38 | 3.2E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 45 | 52 | 3.2E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 38 | 45 | 3.2E-6 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_023886131.1 | endochitinase-like [Quercus suber] | 0 |
| P36907 | Endochitinase OS=Pisum sativum OX=3888 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T1QFD3 | Chitin-binding type-1 domain-containing protein OS=Carya illinoinensis OX=32201 GN=CIPAW_05G050500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology