Basic Information
Locus ID:
Ceq09G0359
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Small ubiquitinrelated modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr09 | 5202796 | 5204602 | - | Ceq09G0359 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 17,137.34 Da | 50.82 | 69.38 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 80 | 137 | 2.3E-12 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 78 | 143 | 4.27E-14 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 27 | 143 | 9.6E-19 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 47 | - | - |
| Coils | Coil | Coil | 39 | 66 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55856.1 | Ubiquitin-like superfamily protein. | 0 |
| RefSeq | XP_028753906.1 | small ubiquitin-related modifier 1-like [Prosopis alba] | 0 |
| Q12306 | Ubiquitin-like protein SMT3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SMT3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8J3V8 | Small ubiquitin-related modifier OS=Gossypium hirsutum OX=3635 GN=LOC107903470 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology