Basic Information
Locus ID:
Ceq08G2269
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Glutelin type-A
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 24728594 | 24730782 | - | Ceq08G2269 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 38,498.75 Da | 30.57 | 90.65 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 3 | 173 | 1.30401E-67 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 198 | 353 | 4.78116E-80 | - |
| Pfam | PF00190 | Cupin | 11 | 157 | 7.7E-29 | IPR006045 |
| Pfam | PF00190 | Cupin | 202 | 339 | 7.3E-24 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 16 | 345 | 2.6E-52 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 4 | 194 | 3.9E-35 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 195 | 356 | 1.9E-51 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 3 | 157 | 8.7E-32 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 195 | 339 | 8.9E-18 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 211 | 231 | 4.0E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 294 | 312 | 4.0E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 258 | 274 | 4.0E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 316 | 333 | 4.0E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 276 | 291 | 4.0E-16 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_023890110.1 | glutelin type-B 5-like isoform X2 [Quercus suber] | 0 |
| Q9ZWA9 | 12S seed storage protein CRD OS=Arabidopsis thaliana OX=3702 GN=CRD PE=1 SV=1 | 0 | |
| TrEMBL | A0A660KXY0 | 11S globulin OS=Carpinus fangiana OX=176857 GN=FH972_011318 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology