Basic Information
Locus ID:
Ceq08G2131
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 23408690 | 23411516 | - | Ceq08G2131 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.60 | 34,782.27 Da | 55.10 | 69.55 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 11 | 182 | 3.0E-74 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 107 | 180 | 4.7E-34 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 1 | 106 | 5.1E-39 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 269 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G29070.2 | Ubiquitin fusion degradation UFD1 family protein. | 0 |
| RefSeq | XP_023897050.1 | ubiquitin fusion degradation protein 1 homolog isoform X1 [Quercus suber] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8T1NRT4 | Ubiquitin fusion degradaton protein OS=Carya illinoinensis OX=32201 GN=CIPAW_13G091700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology