Basic Information
Locus ID:
Ceq08G1734
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 19685801 | 19691253 | + | Ceq08G1734 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 55,722.85 Da | 37.54 | 93.01 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 323 | 457 | 1.7E-19 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 75 | 209 | 2.8E-17 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 317 | 458 | 3.27E-25 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 49 | 210 | 1.44E-23 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 295 | 457 | 1.0E-18 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 45 | 209 | 4.4E-14 | IPR036378 |
| SMART | SM00554 | fasc_3 | 104 | 210 | 4.1E-16 | IPR000782 |
| SMART | SM00554 | fasc_3 | 352 | 458 | 4.4E-18 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 311 | 455 | 18.622583 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 63 | 207 | 16.740396 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 496 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 303 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60490.1 | FASCICLIN-like arabinogalactan-protein 12. | 0 |
| RefSeq | XP_023919545.1 | fasciclin-like arabinogalactan protein 12 [Quercus suber] | 0 |
| Q8LEE9 | Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA12 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6A1WM99 | Fasciclin-like arabinogalactan protein 12 OS=Morella rubra OX=262757 GN=CJ030_MR1G014152 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology