Basic Information
Locus ID:
Ceq08G1613
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 17990908 | 18009605 | - | Ceq08G1613 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 134,434.41 Da | 44.01 | 78.97 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02659 | peptidase_C19C | 199 | 553 | 6.3609E-163 | - |
| CDD | cd00121 | MATH | 58 | 181 | 1.44746E-39 | IPR002083 |
| Pfam | PF00917 | MATH domain | 63 | 182 | 7.3E-18 | IPR002083 |
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 914 | 1125 | 2.6E-55 | IPR029346 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 201 | 548 | 4.9E-44 | IPR001394 |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 652 | 904 | 6.2E-79 | IPR024729 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 54 | 189 | 1.64E-42 | - |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 196 | 580 | 2.94E-94 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 197 | 552 | 3.6E-86 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 712 | 829 | 5.1E-45 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 55 | 196 | 5.6E-53 | IPR008974 |
| Gene3D | G3DSA:3.10.20.90 | - | 830 | 927 | 2.6E-29 | - |
| SMART | SM00061 | math_3 | 58 | 162 | 1.2E-21 | IPR002083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 201 | 551 | 38.83009 | IPR028889 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 56 | 181 | 38.903259 | IPR002083 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 202 | 217 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 467 | 484 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
| Coils | Coil | Coil | 564 | 592 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06600.1 | ubiquitin-specific protease 12. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_042957718.1 | ubiquitin C-terminal hydrolase 12-like isoform X1 [Carya illinoinensis] | 0 |
| Q9FPT1 | Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A660KNH1 | ubiquitinyl hydrolase 1 OS=Carpinus fangiana OX=176857 GN=FH972_010482 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology