Basic Information
Locus ID:
Ceq08G1325
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 12834994 | 12840061 | + | Ceq08G1325 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 66,946.00 Da | 46.19 | 95.06 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 19 | 123 | 4.81479E-46 | - |
| Pfam | PF00651 | BTB/POZ domain | 27 | 114 | 9.6E-8 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 211 | 475 | 1.9E-94 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 18 | 115 | 2.43E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 13 | 117 | 1.0E-11 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 211 | 499 | 93.14267 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 98 | 11.93656 | IPR000210 |
| Coils | Coil | Coil | 545 | 572 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_021817884.1 | BTB/POZ domain-containing protein At5g03250 [Prunus avium] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6RMA3 | NPH3 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_017567 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology