Basic Information
Locus ID:
Ceq08G1311
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 12566907 | 12569351 | - | Ceq08G1311 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 49,742.42 Da | 36.50 | 84.72 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 49 | 183 | 1.2E-20 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 278 | 413 | 3.1E-15 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 30 | 184 | 1.31E-27 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 255 | 413 | 1.7E-22 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 19 | 183 | 2.8E-20 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 241 | 413 | 1.0E-17 | IPR036378 |
| SMART | SM00554 | fasc_3 | 78 | 184 | 1.2E-25 | IPR000782 |
| SMART | SM00554 | fasc_3 | 307 | 414 | 3.4E-18 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 266 | 411 | 19.173466 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 37 | 181 | 21.101561 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 208 | 224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 427 | 446 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03170.1 | FASCICLIN-like arabinogalactan-protein 11. | 0 |
| RefSeq | XP_018847793.2 | fasciclin-like arabinogalactan protein 11 [Juglans regia] | 0 |
| Q8LEJ6 | Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA11 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2I4GV76 | fasciclin-like arabinogalactan protein 11 OS=Juglans regia OX=51240 GN=LOC109011164 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology