Basic Information
Locus ID:
Ceq08G0991
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Short Name:
PDC1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 9260784 | 9264603 | - | Ceq08G0991 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 65,275.92 Da | 33.96 | 91.09 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 48 | 209 | 3.62959E-91 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 407 | 589 | 1.48929E-87 | - |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 452 | 577 | 1.7E-14 | IPR011766 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 242 | 359 | 7.8E-22 | IPR012000 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 45 | 212 | 1.4E-35 | IPR012001 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 237 | 384 | 3.71E-34 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 45 | 219 | 2.64E-44 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 407 | 601 | 1.58E-41 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 42 | 217 | 8.9E-61 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 401 | 588 | 6.1E-56 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 232 | 394 | 1.4E-42 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 39 | 601 | 1.3E-212 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_018825886.1 | pyruvate decarboxylase 1 [Juglans regia] | 0 |
| Q9M040 | Pyruvate decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=PDC4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2I4F2K8 | pyruvate decarboxylase OS=Juglans regia OX=51240 GN=LOC108994918 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology