Basic Information
Locus ID:
Ceq08G0467
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Carbohydrate-binding protein of the ER
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 4076094 | 4088518 | + | Ceq08G0467 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 188,602.66 Da | 33.77 | 84.44 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 520 | 784 | 6.18955E-90 | - |
| CDD | cd14066 | STKc_IRAK | 1332 | 1596 | 4.82548E-89 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 519 | 783 | 2.3E-46 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1331 | 1595 | 2.2E-46 | IPR001245 |
| Pfam | PF12819 | Malectin-like domain | 849 | 1211 | 1.1E-38 | IPR024788 |
| Pfam | PF12819 | Malectin-like domain | 36 | 399 | 5.0E-37 | IPR024788 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 492 | 786 | 3.78E-75 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1310 | 1595 | 1.19E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 499 | 590 | 2.2E-33 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 220 | 401 | 9.0E-30 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 1034 | 1213 | 1.5E-27 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 34 | 194 | 2.8E-22 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 846 | 1008 | 6.5E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1311 | 1402 | 4.6E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1403 | 1616 | 8.1E-60 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 591 | 807 | 4.1E-59 | - |
| SMART | SM00220 | serkin_6 | 1326 | 1598 | 2.2E-26 | IPR000719 |
| SMART | SM00220 | serkin_6 | 514 | 786 | 2.1E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1326 | 1598 | 34.98661 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 514 | 786 | 33.827621 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 520 | 543 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1332 | 1355 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 635 | 647 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1447 | 1459 | - | IPR008271 |
| Coils | Coil | Coil | 776 | 796 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_050379967.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC126797372 [Potentilla anserina] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A7J6HSN6 | Protein kinase domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_027438 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 6 | Ceq08G0461, Ceq08G0462, Ceq08G0464, Ceq08G0465, Ceq08G0466 ... |
| Casuarinaceae | Casuarina glauca | 6 | Cgl08G0408, Cgl08G0410, Cgl08G0414, Cgl08G0415, Cgl08G0424 ... |