Basic Information
Locus ID:
Ceq08G0461
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Carbohydrate-binding protein of the ER
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 3981385 | 3983979 | + | Ceq08G0461 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 90,055.30 Da | 34.20 | 87.20 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 454 | 718 | 2.2461E-93 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 453 | 717 | 2.4E-48 | IPR001245 |
| Pfam | PF12819 | Malectin-like domain | 131 | 341 | 4.5E-23 | IPR024788 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 433 | 715 | 2.56E-77 | IPR011009 |
| Gene3D | G3DSA:2.60.120.430 | - | 37 | 141 | 9.7E-14 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 410 | 524 | 6.8E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 525 | 736 | 1.3E-59 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 167 | 342 | 4.9E-24 | - |
| SMART | SM00220 | serkin_6 | 448 | 721 | 6.9E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 448 | 720 | 35.834648 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 569 | 581 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 454 | 477 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_018832779.1 | receptor-like protein kinase FERONIA [Juglans regia] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A1VKG0 | Receptor-like protein kinase FERONIA OS=Morella rubra OX=262757 GN=CJ030_MR6G013282 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 6 | Ceq08G0461, Ceq08G0462, Ceq08G0464, Ceq08G0465, Ceq08G0466 ... |
| Casuarinaceae | Casuarina glauca | 6 | Cgl08G0408, Cgl08G0410, Cgl08G0414, Cgl08G0415, Cgl08G0424 ... |