Basic Information
Locus ID:
Ceq08G0153
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
calcium-binding protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 1346592 | 1347049 | + | Ceq08G0153 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.86 | 16,993.28 Da | 30.38 | 71.51 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01582 | TIR domain | 3 | 138 | 1.2E-41 | IPR000157 |
| SUPERFAMILY | SSF52200 | Toll/Interleukin receptor TIR domain | 3 | 138 | 1.83E-37 | IPR035897 |
| Gene3D | G3DSA:3.40.50.10140 | - | 2 | 146 | 2.7E-55 | IPR035897 |
| SMART | SM00255 | till_3 | 3 | 135 | 4.8E-35 | IPR000157 |
| ProSiteProfiles | PS50104 | TIR domain profile. | 1 | 146 | 28.408165 | IPR000157 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
ko04014 (Ras signaling pathway)
map04014 (Ras signaling pathway)
ko04015 (Rap1 signaling pathway)
map04015 (Rap1 signaling pathway)
ko04016 (MAPK signaling pathway - plant)
map04016 (MAPK signaling pathway - plant)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04022 (cGMP-PKG signaling pathway)
map04022 (cGMP-PKG signaling pathway)
ko04024 (cAMP signaling pathway)
map04024 (cAMP signaling pathway)
ko04070 (Phosphatidylinositol signaling system)
map04070 (Phosphatidylinositol signaling system)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
ko04745 (Phototransduction - fly)
map04745 (Phototransduction - fly)
ko04750 (Inflammatory mediator regulation of TRP channels)
map04750 (Inflammatory mediator regulation of TRP channels)
ko04916 (Melanogenesis)
map04916 (Melanogenesis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72890.1 | Disease resistance protein (TIR-NBS class). | 0 |
| RefSeq | XP_011015316.1 | PREDICTED: TMV resistance protein N-like, partial [Populus euphratica] | 0 |
| V9M2S5 | Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T1NMM5 | TIR domain-containing protein OS=Carya illinoinensis OX=32201 GN=CIPAW_13G072300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology