Basic Information
Locus ID:
Ceq08G0040
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Encoded by
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 371682 | 394853 | + | Ceq08G0040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 225,017.89 Da | 37.56 | 83.57 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 1053 | 1294 | 9.36872E-143 | - |
| CDD | cd10810 | GH38N_AMII_LAM_like | 51 | 326 | 1.44758E-178 | - |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 1106 | 1330 | 7.7E-58 | IPR000602 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 368 | 460 | 9.4E-20 | IPR015341 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 1335 | 1427 | 3.0E-21 | IPR015341 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 610 | 825 | 1.8E-48 | IPR011682 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 1583 | 1798 | 3.4E-47 | IPR011682 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 1054 | 1105 | 4.0E-9 | IPR000602 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 52 | 363 | 2.7E-93 | IPR000602 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 1880 | 1987 | 3.5E-11 | IPR041147 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 907 | 1012 | 3.1E-9 | IPR041147 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 367 | 460 | 4.9E-27 | IPR028995 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 40 | 366 | 1.11E-108 | IPR011330 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 1438 | 1990 | 1.22E-143 | IPR011013 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 462 | 1016 | 1.73E-143 | IPR011013 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 1042 | 1331 | 2.15E-84 | IPR011330 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 1334 | 1427 | 2.29E-27 | IPR028995 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 1053 | 1105 | 3.9E-17 | IPR027291 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 1106 | 1298 | 2.7E-74 | IPR027291 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 1299 | 1377 | 2.5E-29 | IPR037094 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 332 | 410 | 2.1E-29 | IPR037094 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 51 | 331 | 3.0E-122 | IPR027291 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 1378 | 1434 | 2.2E-22 | IPR037094 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 411 | 466 | 5.3E-21 | IPR037094 |
| Gene3D | G3DSA:2.70.98.30 | - | 607 | 873 | 1.3E-93 | - |
| Gene3D | G3DSA:2.60.40.1180 | - | 479 | 606 | 1.5E-29 | IPR013780 |
| Gene3D | G3DSA:2.60.40.1360 | - | 1866 | 1992 | 8.7E-36 | - |
| Gene3D | G3DSA:2.60.40.1180 | - | 1456 | 1581 | 2.0E-26 | IPR013780 |
| Gene3D | G3DSA:2.70.98.30 | - | 1582 | 1846 | 2.7E-93 | - |
| Gene3D | G3DSA:2.60.40.1360 | - | 894 | 1020 | 2.5E-34 | - |
| SMART | SM00872 | Alpha_mann_mid_2 | 1335 | 1409 | 2.3E-22 | IPR015341 |
| SMART | SM00872 | Alpha_mann_mid_2 | 368 | 442 | 5.9E-21 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26720.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_050270645.1 | alpha-mannosidase At3g26720-like [Quercus robur] | 0 |
| P94078 | Alpha-mannosidase At3g26720 OS=Arabidopsis thaliana OX=3702 GN=At3g26720 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803QKY2 | alpha-mannosidase OS=Cannabis sativa OX=3483 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology