Basic Information
Locus ID:
Ceq07G1890
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Lipopolysaccharide kinase (Kdo/WaaP) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 20702843 | 20705820 | + | Ceq07G1890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.12 | 41,187.03 Da | 42.48 | 78.39 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 53 | 317 | 3.3E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 44 | 320 | 1.15E-52 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 139 | 364 | 2.1E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 54 | 138 | 8.2E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 52 | 317 | 31.014956 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17290.1 | Calcium-dependent protein kinase family protein. Encodes calcium dependent protein kinase 6 (CPK6), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK6 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. CPK3 is also a member of the Arabidopsis CDPK family. | 0 |
| RefSeq | XP_016516068.1 | PREDICTED: calcium-dependent protein kinase 5-like [Nicotiana tabacum] | 0 |
| A5A7I7 | Calcium-dependent protein kinase 4 OS=Solanum tuberosum OX=4113 GN=CPK4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1S4DRL4 | calcium-dependent protein kinase 5-like OS=Nicotiana tabacum OX=4097 GN=LOC107832719 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.3251.V1.1 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq07G1890, Ceq07G1892 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl07G2059, Cgl07G2061 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0434s00004.v1.0 |
| Zosteraceae | Zostera marina | 1 | Zosma04g04520.v3.1 |