Basic Information
Locus ID:
Ceq07G1845
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Endochitinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 19648154 | 19654152 | - | Ceq07G1845 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 67,985.35 Da | 36.21 | 61.07 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06921 | ChtBD1_GH19_hevein | 343 | 381 | 8.53244E-19 | - |
| CDD | cd00325 | chitinase_GH19 | 393 | 622 | 2.45199E-110 | - |
| CDD | cd00325 | chitinase_GH19 | 79 | 308 | 3.58319E-113 | - |
| CDD | cd06921 | ChtBD1_GH19_hevein | 24 | 62 | 5.81972E-18 | - |
| Pfam | PF00187 | Chitin recognition protein | 25 | 62 | 2.8E-13 | IPR001002 |
| Pfam | PF00182 | Chitinase class I | 392 | 622 | 8.7E-130 | IPR000726 |
| Pfam | PF00182 | Chitinase class I | 78 | 308 | 6.9E-131 | IPR000726 |
| Pfam | PF00187 | Chitin recognition protein | 344 | 381 | 6.5E-14 | IPR001002 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 25 | 64 | 4.32E-11 | IPR036861 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 344 | 384 | 2.09E-12 | IPR036861 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 75 | 315 | 3.09E-109 | IPR023346 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 388 | 629 | 2.33E-106 | IPR023346 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 161 | 217 | 3.1E-122 | - |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 475 | 531 | 2.1E-121 | - |
| Gene3D | G3DSA:1.10.530.10 | - | 78 | 309 | 3.1E-122 | - |
| Gene3D | G3DSA:1.10.530.10 | - | 392 | 623 | 2.1E-121 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 342 | 383 | 6.2E-17 | IPR036861 |
| Gene3D | G3DSA:3.30.60.10 | - | 23 | 65 | 8.0E-16 | IPR036861 |
| SMART | SM00270 | ChitinBD_3 | 25 | 62 | 3.0E-15 | IPR001002 |
| SMART | SM00270 | ChitinBD_3 | 344 | 381 | 2.3E-16 | IPR001002 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 23 | 64 | 11.02506 | IPR001002 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 342 | 383 | 11.094673 | IPR001002 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 354 | 373 | - | IPR018371 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 410 | 432 | - | IPR000726 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 221 | 231 | - | IPR000726 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 535 | 545 | - | IPR000726 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 96 | 118 | - | IPR000726 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 35 | 54 | - | IPR018371 |
| PRINTS | PR00451 | Chitin-binding domain signature | 360 | 367 | 6.3E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 367 | 374 | 6.3E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 352 | 360 | 6.3E-6 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_017621548.1 | PREDICTED: endochitinase 1 [Gossypium arboreum] | 0 |
| Q39799 | Endochitinase 1 OS=Gossypium hirsutum OX=3635 PE=3 SV=1 | 0 | |
| TrEMBL | A0A6P4NAD3 | endochitinase 1 OS=Gossypium arboreum OX=29729 GN=LOC108465681 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology