Basic Information
Locus ID:
Ceq07G1841
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Endochitinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 19609624 | 19611592 | - | Ceq07G1841 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.73 | 43,442.45 Da | 55.09 | 50.91 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00325 | chitinase_GH19 | 149 | 378 | 2.45373E-114 | - |
| CDD | cd06921 | ChtBD1_GH19_hevein | 65 | 102 | 3.27781E-10 | - |
| CDD | cd00035 | ChtBD1 | 23 | 61 | 8.37508E-12 | - |
| Pfam | PF00187 | Chitin recognition protein | 23 | 60 | 1.8E-11 | IPR001002 |
| Pfam | PF00182 | Chitinase class I | 148 | 378 | 7.0E-129 | IPR000726 |
| Pfam | PF00187 | Chitin recognition protein | 65 | 102 | 5.0E-7 | IPR001002 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 23 | 64 | 1.57E-9 | IPR036861 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 65 | 113 | 3.62E-8 | IPR036861 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 145 | 385 | 7.59E-107 | IPR023346 |
| Gene3D | G3DSA:3.30.60.10 | - | 64 | 104 | 3.4E-8 | IPR036861 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 231 | 287 | 5.9E-122 | - |
| Gene3D | G3DSA:1.10.530.10 | - | 148 | 379 | 5.9E-122 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 21 | 63 | 1.8E-12 | IPR036861 |
| SMART | SM00270 | ChitinBD_3 | 23 | 60 | 2.1E-12 | IPR001002 |
| SMART | SM00270 | ChitinBD_3 | 65 | 102 | 1.5E-5 | IPR001002 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 21 | 62 | 10.269255 | IPR001002 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 63 | 104 | 9.080851 | IPR001002 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 291 | 301 | - | IPR000726 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 166 | 188 | - | IPR000726 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 33 | 52 | - | IPR018371 |
| PRINTS | PR01217 | Proline rich extensin signature | 106 | 127 | 1.6E-10 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 127 | 143 | 1.6E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 139 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_018856906.1 | endochitinase 2-like [Juglans regia] | 0 |
| P06215 | Endochitinase OS=Phaseolus vulgaris OX=3885 PE=1 SV=1 | 0 | |
| TrEMBL | B0ZC08 | Chitinase class I OS=Casuarina glauca OX=3522 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology