Basic Information
Locus ID:
Ceq07G1769
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Hippocampus abundant
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 18891696 | 18897638 | + | Ceq07G1769 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 37,920.98 Da | 34.03 | 108.05 | 0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07690 | Major Facilitator Superfamily | 2 | 284 | 1.1E-14 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 2 | 333 | 7.85E-29 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 1 | 343 | 2.6E-26 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 1 | 131 | 9.186876 | IPR020846 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_018823819.1 | hippocampus abundant transcript 1 protein-like isoform X2 [Juglans regia] | 0 |
| P02982 | Tetracycline resistance protein, class A OS=Escherichia coli OX=562 GN=tetA PE=3 SV=2 | 0 | |
| TrEMBL | A0A6A1UNH6 | Hippocampus abundant transcript 1 protein OS=Morella rubra OX=262757 GN=CJ030_MR0G006688 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology