Basic Information
Locus ID:
Ceq07G1702
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 18370480 | 18381287 | + | Ceq07G1702 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 203,694.64 Da | 48.30 | 84.78 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 1476 | 1890 | 2.7644E-124 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 1524 | 1895 | 6.2E-82 | IPR000569 |
| SUPERFAMILY | SSF48371 | ARM repeat | 82 | 658 | 4.32E-42 | IPR016024 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 1468 | 1888 | 8.63E-95 | IPR035983 |
| Gene3D | G3DSA:1.25.10.10 | - | 183 | 666 | 1.5E-52 | IPR011989 |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1766 | 1893 | 4.4E-33 | - |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 1416 | 1657 | 3.1E-44 | - |
| SMART | SM00185 | arm_5 | 301 | 341 | 61.0 | IPR000225 |
| SMART | SM00119 | hect_3 | 1487 | 1895 | 1.6E-85 | IPR000569 |
| SMART | SM00185 | arm_5 | 344 | 382 | 9.8 | IPR000225 |
| SMART | SM00185 | arm_5 | 218 | 259 | 39.0 | IPR000225 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 1500 | 1895 | 55.575813 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 689 | 717 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 965 | 1118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1286 | 1310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1288 | 1310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 966 | 1021 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 659 | 717 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1079 | 1113 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1143 | 1170 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 659 | 677 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 137 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1053 | 1067 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 77 | 127 | - | - |
| Coils | Coil | Coil | 100 | 120 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38600.1 | HEAT repeat ;HECT-domain (ubiquitin-transferase). encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. | 0 |
| RefSeq | XP_030943574.1 | E3 ubiquitin-protein ligase UPL3 [Quercus lobata] | 0 |
| Q6WWW4 | E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana OX=3702 GN=UPL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6QNN0 | HECT-type E3 ubiquitin transferase OS=Carpinus fangiana OX=176857 GN=FH972_005234 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology