Basic Information
Locus ID:
Ceq07G1576
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
11S globulin seed storage protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 16905440 | 16908458 | + | Ceq07G1576 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 38,500.45 Da | 36.31 | 89.27 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 3 | 165 | 2.61878E-68 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 200 | 355 | 2.57018E-70 | - |
| Pfam | PF00190 | Cupin | 13 | 155 | 2.1E-20 | IPR006045 |
| Pfam | PF00190 | Cupin | 203 | 338 | 7.2E-22 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 17 | 344 | 8.09E-43 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 9 | 177 | 2.9E-34 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 195 | 358 | 3.4E-49 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 192 | 341 | 4.4E-22 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 3 | 159 | 8.4E-29 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 213 | 233 | 2.8E-8 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 260 | 276 | 2.8E-8 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 278 | 293 | 2.8E-8 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G07750.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_050272644.1 | cocosin 1-like [Quercus robur] | 0 |
| TrEMBL | A0A5N6QPH9 | 11-S seed storage protein, plant OS=Carpinus fangiana OX=176857 GN=FH972_005514 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology