halophFGD

Basic Information

Locus ID: Ceq07G1405

Species & Taxonomic ID: Casuarina equisetifolia & 3523

Genome Assembly: GCA_028551475.1

Description: Cell division cycle 20.2, cofactor of APC complex-like

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr07	14640033	14644265	-	Ceq07G1405

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.48	18,749.48 Da	32.16	77.59	-0.12

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF50978	WD40 repeat-like	7	43	1.56E-6	IPR036322
Gene3D	G3DSA:2.130.10.10	-	1	67	2.5E-7	IPR015943
SMART	SM00320	WD40_4	2	41	6.3E-4	IPR001680
ProSiteProfiles	PS50082	Trp-Asp (WD) repeats profile.	9	41	11.64467	IPR001680
ProSiteProfiles	PS50294	Trp-Asp (WD) repeats circular profile.	9	41	9.731054	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K03363 (cell division cycle 20, cofactor of APC complex)

Pathway:

ko04110 (Cell cycle) map04110 (Cell cycle) ko04111 (Cell cycle - yeast) map04111 (Cell cycle - yeast) ko04113 (Meiosis - yeast) map04113 (Meiosis - yeast) ko04114 (Oocyte meiosis) map04114 (Oocyte meiosis) ko04120 (Ubiquitin mediated proteolysis) map04120 (Ubiquitin mediated proteolysis)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_018851139.2	cell division cycle 20.2, cofactor of APC complex-like [Juglans regia]	0
TrEMBL	A0A6A1WDV8	Cell division cycle 20.1, cofactor of APC complex OS=Morella rubra OX=262757 GN=CJ030_MR2G024876 PE=3 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Casuarinaceae	Casuarina equisetifolia	1	Ceq07G1405
Casuarinaceae	Casuarina glauca	1	Cgl07G1489