Basic Information
Locus ID:
Ceq07G1023
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 9798978 | 9801111 | + | Ceq07G1023 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.17 | 43,814.38 Da | 51.18 | 71.74 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01753 | MYND finger | 325 | 364 | 4.5E-8 | IPR002893 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 319 | 369 | 7.5E-10 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 48 | 114 | 3.92E-5 | IPR036047 |
| SUPERFAMILY | SSF81901 | HCP-like | 119 | 237 | 1.29E-13 | - |
| Gene3D | G3DSA:6.10.140.2220 | - | 315 | 369 | 9.1E-11 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 98 | 252 | 2.8E-18 | IPR011990 |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 322 | 364 | 10.919942 | IPR002893 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 403 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67340.1 | HCP-like superfamily protein with MYND-type zinc finger. | 0 |
| RefSeq | XP_018836759.1 | F-box protein At1g67340 [Juglans regia] | 0 |
| Q9FYF9 | F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6R1M8 | MYND-type domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_009370 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology