Basic Information
Locus ID:
Ceq07G0797
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
AMSH-like ubiquitin thioesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 7461729 | 7465954 | - | Ceq07G0797 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 29,165.52 Da | 58.08 | 78.60 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08066 | MPN_AMSH_like | 87 | 264 | 5.77947E-102 | IPR044098 |
| Pfam | PF01398 | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 87 | 193 | 4.1E-17 | IPR000555 |
| SUPERFAMILY | SSF102712 | JAB1/MPN domain | 90 | 220 | 7.59E-22 | - |
| Gene3D | G3DSA:3.40.140.10 | Cytidine Deaminase, domain 2 | 68 | 264 | 1.0E-69 | - |
| SMART | SM00232 | pad1_6 | 89 | 217 | 1.6E-15 | IPR000555 |
| ProSiteProfiles | PS50249 | MPN domain profile. | 90 | 218 | 29.258766 | IPR037518 |
| Coils | Coil | Coil | 264 | 264 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G10600.1 | associated molecule with the SH3 domain of STAM 2. | 0 |
| RefSeq | XP_023917088.1 | AMSH-like ubiquitin thioesterase 2 isoform X1 [Quercus suber] | 0 |
| Q6NKP9 | AMSH-like ubiquitin thioesterase 2 OS=Arabidopsis thaliana OX=3702 GN=AMSH2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7N2R1S6 | MPN domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology