Basic Information
Locus ID:
Ceq07G0777
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 7244192 | 7251177 | - | Ceq07G0777 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 132,702.16 Da | 52.34 | 67.44 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 914 | 1171 | 1.00225E-109 | - |
| CDD | cd06410 | PB1_UP2 | 187 | 282 | 1.17073E-47 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 909 | 1171 | 3.7E-62 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 200 | 284 | 1.8E-21 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 900 | 1170 | 1.52E-75 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 200 | 292 | 1.4E-23 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 202 | 286 | 7.6E-15 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 902 | 995 | 4.7E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 996 | 1184 | 6.4E-53 | - |
| SMART | SM00666 | PB1_new | 198 | 285 | 1.4E-32 | IPR000270 |
| SMART | SM00220 | serkin_6 | 908 | 1177 | 2.7E-51 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 908 | 1176 | 40.414066 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 914 | 935 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1033 | 1045 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1098 | 1120 | 2.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1142 | 1164 | 2.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1027 | 1045 | 2.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 990 | 1003 | 2.1E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 408 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 574 | 600 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 859 | 879 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 360 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04700.1 | PB1 domain-containing protein tyrosine kinase. | 0 |
| RefSeq | XP_018817249.1 | uncharacterized protein LOC108988446 isoform X1 [Juglans regia] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I4ECX7 | uncharacterized protein LOC108988446 isoform X1 OS=Juglans regia OX=51240 GN=LOC108988446 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology